> a '>' or a ';' in the first column is a comment and is ignored ; ; proteins possibly interacting nucleic acids ; ATPASE_ BZIP_BASIC DNAA DNASE_ DNA_MISMATCH HELICASE HELIX_LOOP_HELIX KINASE LIGASE NUCLEAR_RECEPTOR NUCLEASE PHOSPHA POLYMERASE RECA RECF_ RECOMBINASE RIBONUCLEASE RNASE_ RNA_POL SIGMA SSB_ TRANSPOSASE ZINC_FINGER ZN_FINGER